Search results for "Soil microbial community"

Comparison of different tillage systems in organic farming : effect of soil structure and organic matter repartition on soil micro-organisms and thei…

2009

Over the last decades, the surface traditionally ploughed has tended to decrease and replaced by shallow working tillage techniques without soil inversion, i.e., no tillage or reduced tillage with tines or discs. These techniques were mostly developed in conventional farming systems but nowadays they are also developed in organic farming systems. Nevertheless, these tillage techniques could generate crop nutrients deficiencies and a deterioration of soil structure, especially during the first years of their application. As the use of synthetic fertilizers is forbidden in organic farming, a decrease of the soil fertility could be very detrimental for crop growth. Indeed, soil micro-organisms…

Plant-soil interactions in cold climate

2013

"Role of Arbuscular Mycorrhizal Fungi in Nutrient Uptake and Growth of Durum Wheat"

Soil microbiome is involved at different levels in the food web, in bio-geochemical nutrient cycles and in several interactions with plants. Based on its key role in the agro-ecosystem processes, the soil microbiome has been identified as one of the principal factors in an agriculture addressed to the ecological intensification. Among the several relationships established between plants and soil microorganisms, arbuscular mycorrhizal (AM) symbiosis is the most widespread. Two out of three of all plant taxa (among others the main crops) are involved in the AM symbiosis which takes place between the plant root system and arbuscular mycorrhizal fungi (AMF), a monophyletic group of fungi belong…

Ecological role of mycotoxins produced by Fusarium graminearum : consequences of the presence of deoxynivalenol (DON) in crop residues on the soil mi…

2012

Fusarium graminearum is a plant pathogenic fungus, causing devastating disease “Fusarium head blight” (FHB) in cereals including wheat and maize. It also contaminates the grains with mycotoxins including deoxynivalenol (DON) which are toxic to human and animals. This disease has resulted in the serious losses in grain yield and quality. We established through a first bibliographic review that during off season fungus survives saprophytically on the crop residues (ecological habitat) and serves as primary inoculum for the next season crop. However, we noticed also that the literature was poor about the role mycotoxins could play in the establishment of F. graminearum in such a habitat. The m…

Microbial-biogeography at the scale of France by the use of molecular tools applied to the French soil quality monitoring network (RMQS)

2009

International audience

Deciphering Biotic Interactions and Their Role in Soil Microbial Community Assembly and Functions

2022

Microbial communities play a key role in ecosystem functioning as well as in plant, animal, and human welfare. Their assembly relies on different processes commonly referred to as abiotic and biotic filters. Despite the widespread emphasis on abiotic filters in terrestrial ecosystems, a growing body of evidence suggests that interactions between microorganisms play a critical role in community assembly. However, the contribution of these interactions to microbial community assembly and the factors influencing them have not been clearly established. In most cases, biotic interactions between microorganisms have been investigated based on cocultures of a handful of strains, completely overloo…

Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree

2009

International audience; Whether bacteria display spatial patterns of distribution and at which level of taxonomic organization such patterns can be observed are central questions in microbial ecology. Here we investigated how the total and relative abundances of eight bacterial taxa at the phylum or class level were spatially distributed in a pasture by using quantitative PCR and geostatistical modelling. The distributions of the relative abundance of most taxa varied by a factor of 2.5–6.5 and displayed strong spatial patterns at the field scale. These spatial patterns were taxon-specific and correlated to soil properties, which indicates that members of a bacterial clade defined at high t…